PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S03023.30
Common NameJCGZ_02314, LOC105632121
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 139aa    MW: 15582.3 Da    PI: 8.8311
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S03023.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-192070255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr+++ +g+++AeIrd +    + +r++lg+f taeeAa+a+++a+ +++g
  Jcr4S03023.30 20 KYRGVRRRP-WGKFAAEIRDSTR---HgARVWLGTFKTAEEAARAYDRAAYAMRG 70
                   8********.**********422...25*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.74E-182079No hitNo description
SuperFamilySSF541711.5E-232079IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.4E-312080IPR001471AP2/ERF domain
SMARTSM003801.8E-332084IPR001471AP2/ERF domain
PfamPF008471.5E-142070IPR001471AP2/ERF domain
PROSITE profilePS5103223.632078IPR001471AP2/ERF domain
PRINTSPR003671.2E-112132IPR001471AP2/ERF domain
PRINTSPR003671.2E-114460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MDEDKSTKSN KEERSDGEVK YRGVRRRPWG KFAAEIRDST RHGARVWLGT FKTAEEAARA  60
YDRAAYAMRG QFAILNFPNE YPLTSTAGAG ASSSSSSSAP PPPPPSSSAM TRQVFEIEYL  120
DDKLLEEMLE TEEQKNKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-272178663ATERF1
3gcc_A6e-272178663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012069809.17e-99PREDICTED: ethylene-responsive transcription factor ERF096
SwissprotQ9LTC53e-43ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A067KVU68e-99A0A067KVU6_JATCU; Uncharacterized protein
STRINGVIT_07s0005g03210.t011e-44(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-32ERF family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]